Fungal Genomics [E-Book] : Methods and Protocols / edited by Ronald P. de Vries, Adrian Tsang, Igor V. Grigoriev.
Grigoriev, Igor V., (editor)
Tsang, Adrian, (editor) / de Vries, Ronald P., (editor)
2nd ed. 2018.
New York, NY : Humana Press, 2018
XI, 291 p. 57 illus., 48 illus. in color. online resource.
Methods in Molecular Biology ; 1775
Full Text
Table of Contents:
  • Introduction to the Book: Overview of Fungal Genomics
  • Fungal Genomic DNA Extraction Methods for Rapid Genotyping and Genome Sequencing
  • Purification of Fungal High Molecular Weight Genomic DNA from Environmental Samples
  • Genome Sequencing
  • Methods for Genomic Characterization and Maintenance of Anaerobic Fungi
  • Efficient Extraction Method for High Quality Fungal RNA from Complex Lignocellulosic Substrates
  • Isolation of high quality RNA for Metatranscriptome Analysis of Lignocellulose Digestion in the Rumen
  • Fungal Transcriptomics
  • Mass Spectrometrybased Proteomics
  • Mass Spectrometry Based Metabolomics
  • Genome Editing - CRISPR/cas9
  • Evolutionary Adaptation to Generate Mutants
  • Genome Assembly
  • Fungal Epigenomics: Detection and Analysis
  • Fungal Genome Annotation
  • Manual Gene Curation and Functional Annotation
  • Evaluating Programs for Predicting Genes and Transcripts with RNA-Seq Support in Fungal Genomes
  • Genomic Sequence Variation Analysis by Resequencing
  • ChIP-seq Analysis in Neurospora crass
  • Fungal Phylogenomics
  • Phylogenetic Analysis of Protein Family
  • Parasexual Crossings for Bulk Segregant Analysis in Aspergillus Niger To Facilitate Mutant Identification Via Whole Genome Sequencing. .