Stem Cell Transcriptional Networks [E-Book] : Methods and Protocols / edited by Benjamin L. Kidder.
This second edition provides techniques used to study of the underlying transcriptional programs of stem cells that promote self-renewal and differentiation. Chapters detail next-generation sequencing technologies, data analysis, protocols on analysis and visualization of single-cell RNA-Seq data, a...
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Personal Name(s): | Kidder, Benjamin L., editor |
Edition: |
2nd edition 2020. |
Imprint: |
New York, NY :
Humana Press,
2020
|
Physical Description: |
XI, 308 pages 75 illustrations, 67 illustrations in color (online resource) |
Note: |
englisch |
ISBN: |
9781071603017 |
DOI: |
10.1007/978-1-0716-0301-7 |
Series Title: |
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Methods in Molecular Biology ;
2117 |
Subject (ZB): | |
Subject (LOC): | |
Classification: |
- Epitope Tagging ChIP-seq of DNA Binding Proteins using CETCh-seq
- User-friendly and Interactive Analysis of ChIP-seq data using EaSeq
- Evaluation of 3D Chromatin Interactions using Hi-C
- MSTD for Detecting Topological Domains from 3D Genomic Maps
- Creating 2D Occupancy Plots using plot2DO
- Detection of Epigenetic Field Defects Using a Weighted Epigenetic Distance-based Method
- Profiling Cell Type Abundance and Expression in Bulk Tissues with CIBERSORTx
- Visualization of Single Cell RNA-Seq Data using t-SNE in R
- Use of SuperCT for Enhanced Characterization of Single-cell Transcriptomic Profiles
- Interactive Alternative Splicing Analysis of Human Stem Cells using psichomics
- Gene Ontology Semantic Similarity Analysis using GOSemSim
- Derivation of Maternogenic Epiblast Stem Cells from Haploid Embryos
- Derivation of LIF-independent Embryonic Stem Cells using Inducible OCT4 Expression
- Simultaneous Derivation of Embryonic and Trophoblast Stem Cells from Mouse Blastocysts
- Reprogramming Fibroblasts to Neural Stem Cells by Overexpression of the Transcription factor Ptf1a
- Reprogramming of Fibroblasts to Neural Stem Cells by a Chemical Cocktail
- Efficient RNA-based Reprogramming of Disease-associated Primary Human Fibroblasts into Induced Pluripotent Stem Cells
- Direct Reprogramming Of Mouse Embryonic Fibroblasts to Induced Trophoblast Stem (iTS) Cells
- Characterization of Arsenic-induced Cancer Stem-like Cells. .