TAIR : the arabidopsis information resource [Datenbank]  

The Arabidopsis Information Resource (TAIR) maintains a database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana. Data available from TAIR includes the complete genome sequence along with gene structure, gene product information, gene expression, DNA and seed stocks, genome maps, genetic and physical markers, publications, and information about the Arabidopsis research community. Gene product function data is updated every week from the latest published research literature and community data submissions. TAIR also provides extensive linkouts from the data pages to other Arabidopsis resources.

BioCyc Database Collection [Datenbank]  

BioCyc is a collection of 18,030 Pathway/Genome Databases, plus software tools for exploring them. Key aspects of BioCyc data: - Quality data curated from tens of thousands of publications, including curated databases for E. coli, B. subtilis, S. cerevisiae, and H. sapiens - Computationally predicted metabolic pathways and operons (bacteria and archaea) - Data integrated from other databases including gene essentiality, regulatory networks, protein features, and GO annotations

DNA Databank of Japan (DDBJ) [Datenbank]  

The DNA Data Bank of Japan (DDBJ) is the sole nucleotide sequence data bank in Asia, which is officially certified to collect nucleotide sequences from researchers and to issue the internationally recognized accession number to data submitters.Since we exchange the collected data with EMBL-Bank/EBI; European Bioinformatics Institute and GenBank/NCBI; National Center for Biotechnology Information on a daily basis, the three data banks share virtually the same data at any given time. The virtually unified database is called "INSD; International Nucleotide Sequence Database". DDBJ collects sequence data mainly from Japanese researchers, but of course accepts data and issue the accession number to researchers in any other countries.

ExPASy - Bioinformatics Resource Portal [Datenbank]  

ExPASy is the SIB Bioinformatics Resource Portal which provides access to scientific databases and software tools in different areas of life sciences including proteomics, genomics, phylogeny, systems biology, population genetics, transcriptomics etc.

GENRES - Informationssystem Genetische Ressourcen [Datenbank]  

The Information System Genetic Resources (GENRES) offers information about rare tree species in Germany. These are based on the results of nationally surveys - supported by BMEL - using standardized methodologies to preserve genetic resources of rare and endangered tree species (Black Poplar, Common Yew, Downy Oak, Elm species, Field Maple, Green Alder and Grey Alder, Service Tree, Wild Apple, Wild Cherry, Wild Pear and Wild Service Tree). GENRES is hosted by the Information- and Coordination Centre for Biological Diversity at the BLE.

In silico simulation of molecular biology experiments [Datenbank]  

Tools for in silico experiments with complete genomes. The list of genomes and associated data are updated shortly after their availability at NCBI.

KEGG: Kyoto Encyclopedia of Genes and Genomes [Datenbank]  

KEGG is a database resource for understanding high-level functions and utilities of the biological system, such as the cell, the organism and the ecosystem, from molecular-level information, especially large-scale molecular datasets generated by genome sequencing and other high-throughput experimental technologies. Databases: - KEGG PATHWAY: Pathway information - KEGG GENES: Genomicinformation - KEGG LIGAND: Chemical information - KEGG BRITE: Binary relations and hierarchies etc.

BLAST - Basic Local Alignment Search Tool [Datenbank]  

The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. BLAST can be used to infer functional and evolutionary relationships between sequences as well as help identify members of gene families.