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1

An efficient multiparticle collision dynamics (MPC) approach to immiscible binary fluids: Hydrodynamics and application to membrane protein diffusion

Tan, Zihan
2022

2

Poster

An efficient multiparticle collision dynamics approach (MPC) to immiscible binary fluids: Hydrodynamics and application to membrane protein diffusion

Tan, Zihan
2022

3

Poster

Mesoscale hydrodynamic modeling of G-protein coupled receptors diffusion

Tan, Zihan
2022

4

Talk (non-conference)

An efficient multiparticle collision dynamics approach to membrane protein diffusion

Tan, Zihan
2022

5

Journal Article

Hydrodynamics of immiscible binary fluids with viscosity contrast: a multiparticle collision dynamics approach

Tan, Zihan
2021

Soft matter, 17 (2021) 34, S. 7978 - 7990

OpenAccess

6

Poster

Quasi-two-dimensional diffusion of interacting protein monomers and dimers: A MPC simulation study

Tan, Zihan
2021

OpenAccess

7

Journal Article

Subdiffusive-Brownian crossover in membrane proteins: a Generalized Langevin Equation-based approach

Di Cairano, Loris
2021

Biophysical journal, 120 (2021) 21, S. 4722-4737

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8

Journal Article

Open-Boundary Molecular Mechanics/Coarse-Grained Framework for Simulations of Low-Resolution G-Protein-Coupled Receptor–Ligand Complexes

Tarenzi, Thomas
2019

Journal of chemical theory and computation, 15 (2019) 3, S. 2101–2109

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9

Journal Article

Open Boundary Simulations of Proteins and Their Hydration Shells by Hamiltonian Adaptive Resolution Scheme

Tarenzi, Thomas
2017

Journal of chemical theory and computation, 13 (2017) 11, S. 5647–5657

OpenAccess OpenAccess

10

Journal Article

Molecular Dynamics Simulations of the [2Fe-2S] Cluster-Binding Domain of NEET Proteins Reveal Key Molecular Determinants That Induce Their Cluster Transfer/Release

Pesce, Luca
2017

The @journal of physical chemistry / B, 121 (2017) 47, S. 10648–10656

Restricted Published on 2017-10-31. Available in OpenAccess from 2018-10-31. Restricted

11

Journal Article

Adaptation of Extremophilic Proteins with Temperature and Pressure: Evidence from Initiation Factor 6

Calligari, Paolo A.
2015

The @journal of physical chemistry / B, 119 (2015) 25, S. 7860 - 7873

12

Journal Article

Computational metallomics of the anticancer drug cisplatin

Calandrini, Vania
2015

Journal of inorganic biochemistry, 153 (2015) S. 231 - 238

13

Journal Article

Structural predictions of neurobiologically relevant G-protein coupled receptors and intrinsically disordered proteins

Rossetti, Giulia
2015

Archives of biochemistry and biophysics, 582 (2015) S. 91–100

14

Journal Article

Structural Biology of Cisplatin Complexes with Cellular Targets: The Adduct with Human Copper Chaperone Atox1 in Aqueous Solution

Calandrini, Vania
2014

Chemistry - a European journal, 20 (2014) 37, S. 11719 - 11725

15

Journal Article

Hydration of chloride anions in the NanC Porin from Escherichia coli: A comparative study by QM/MM and MD simulations

Calandrini, V.
2014

The @journal of chemical physics, 141 (2014) 22, S. 22D521 -

OpenAccess OpenAccess

16

Journal Article

Platination of the copper transporter ATP7A involved in anticancer drug resistance

Calandrini, Vania
2014

Dalton transactions, 43 (2014) 31, S. 12085 -

17

Contribution to a book
Contribution to a conference proceedings

nMoldyn - Interfacing spectroscopic experiments, molecular dynamics simulations and models for time correlation functions

Calandrini, V.
2011

12 (2011) Collection SFN,

OpenAccess OpenAccess

18

Journal Article

Conformational transition of DNA bound to Hfq probed by infrared spectroscopy

Geinguenaud, Frédéric
2011

Physical chemistry, chemical physics, 13 (2011) 3, S. 1222 - 1229

19

Journal Article

Kneller, G. R.
2010

Biochimica et biophysica acta / Proteins and proteomics Proteins and proteomics [...], 1804 (2010) 1, S. 56 - 62

20

Journal Article

Fractional protein dynamics seen by nuclear magnetic resonance spectroscopy: Relating molecular dynamics simulation and experiment

Calandrini, Vania
2010

The journal of chemical physics, 133 (2010) 14, S. 145101 -

OpenAccess OpenAccess

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