Protein-Protein Interaction Networks [E-Book] : Methods and Protocols / edited by Stefan Canzar, Francisca Rojas Ringeling.
This volume explores techniques that study interactions between proteins in different species, and combines them with context-specific data, analysis of omics datasets, and assembles individual interactions into higher-order semantic units, i.e., protein complexes and functional modules. The chapter...
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Personal Name(s): | Canzar, Stefan, editor |
Ringeling, Francisca Rojas, editor | |
Edition: |
1st edition 2020. |
Imprint: |
New York, NY :
Humana Press,
2020
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Physical Description: |
XI, 286 pages 97 illustrations, 79 illustrations in color (online resource) |
Note: |
englisch |
ISBN: |
9781493998739 |
DOI: |
10.1007/978-1-4939-9873-9 |
Series Title: |
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Methods in Molecular Biology ;
2074 |
Subject (ZB): | |
Subject (LOC): | |
Classification: |
- Predicting Protein-Protein Interactions using SPRINT
- Automated Extraction and Visualization of Protein-Protein Interaction Networks and Beyond: A Text Mining Protocol
- Construction of Functional Protein Networks using Domain Profile Associations
- Reconstruction of Protein-Protein Interaction Networks using Homology-Based Search: Application to the Autophagy Pathway of Ageing in Podospora anserina
- Predicting Interacting Protein Pairs by Co-Evolutionary Paralog Matching
- A Web-Based Protocol for Inter-Protein Contact Prediction by Deep Learning
- Visual Analysis of Protein-Protein Interaction Docking Models using COZOID Tool
- Path-LZerD: Predicting Assembly Order of Multimeric Protein Complexes
- Embedding Alternative Conformations of Proteins in Protein-Protein Interaction Networks
- Informed Use of Protein-Protein Interaction Data: A Focus on the Integrated Interactions Database (IID)
- Generation and Interpretation of Context-Specific Human Protein-Protein Interaction Networks with HIPPIE
- Explore Protein-Protein Interactions for Cancer Target Discovery using the OncoPPi Portal
- Perform Pathway Enrichment Analysis using ReactomeFIViz
- De Novo Pathway Enrichment with KeyPathwayMiner
- De Novo Pathway-Based Classification of Breast Cancer Subtypes
- Vienna Graph Clustering
- On TD-WGcluster - Theoretical Foundations and Guidelines for the User
- An Introductory Guide to Aligning Networks using SANA, the Simulated Annealing Network Aligner. .