Multiple Sequence Alignment [E-Book] : Methods and Protocols / edited by Kazutaka Katoh.
This volume is a collection of protocols that discuss how to install and run tools for calculation and visualization of multiple sequence alignments (MSAs), and other analyses related to MSAs. Chapters cover basic MSA tools and specially designed tools to deal with new types of data resulting from r...
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Full text |
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Personal Name(s): | Katoh, Kazutaka, editor |
Edition: |
1st edition 2021. |
Imprint: |
New York, NY :
Humana Press,
2021
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Physical Description: |
XIII, 321 pages 112 illustrations, 90 illustrations in color (online resource) |
Note: |
englisch |
ISBN: |
9781071610367 |
DOI: |
10.1007/978-1-0716-1036-7 |
Series Title: |
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Methods in Molecular Biology ;
2231 |
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Subject (LOC): | |
Classification: |
- The Clustal Omega Multiple Alignment Package
- Phylogeny-Aware Alignment with PRANK and PAGAN
- Fast and Accurate Multiple Sequence Alignment with MSAProbs-MPI
- Aligning Protein-Coding Nucleotide Sequences with MACSE
- Cooperation of Spalm and Prrn5 for Construction of Gene-Structure-Aware Multiple Sequence Alignment
- Multiple Sequence Alignment Computation using the T-Coffee Regressive Algorithm Implementation
- Multiple Sequence Alignment for Large Heterogeneous Datasets using SATé, PASTA, and UPP
- Sequence Comparison without Alignment: The SpaM Approaches
- Lamassemble: Multiple Alignment and Consensus Sequence of Long Reads
- Automated Removal of Non-Homologous Sequence Stretches with PREQUAL
- Analysis of Protein Intermolecular Interaction with MAFFT-DASH
- Mustguseal and Sister Web-Methods: A Practical Guide to Bioinformatic Analysis of Protein Superfamilies
- Alignment of Biological Sequences with Jalview
- Evolutionary Sequence Analysis and Visualization with Wasabi
- Seaview Version 5: A Multiplatform Software for Multiple Sequence Alignment, Molecular Phylogenetic Analyses, and Tree Reconciliation
- NCBI Genome Workbench: Desktop Software for Comparative Genomics, Visualization, and GenBank Data Submission
- Revisiting Evaluation of Multiple Sequence Alignment Methods.