Plant Transposable Elements [E-Book] : Methods and Protocols / edited by Jungnam Cho.
This volume details the most up-to-date technologies used in plant transposable element studies and provides easy-to-follow protocols. Chapters guide readers on available database resources, annotation of different families of transposon, and experimental methods to detect their transposition interm...
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Full text |
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Personal Name(s): | Cho, Jungnam, editor |
Edition: |
1st edition 2021. |
Imprint: |
New York, NY :
Humana Press,
2021
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Physical Description: |
XV, 272 pages 61 illustrations, 46 illustrations in color (online resource) |
Note: |
englisch |
ISBN: |
9781071611340 |
DOI: |
10.1007/978-1-0716-1134-0 |
Series Title: |
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Methods in Molecular Biology ;
2250 |
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Classification: |
- A Predictive Approach to Infer the Activity and Natural Variation of Retrotransposon Families in Plants
- In silico Identification of Stress Associated Transposable Elements in Arabidopsis thaliana using Public Transcriptome Data
- A Practical Guide on Computational Tools and Databases for Transposable Elements in Plants
- A Tutorial of EDTA: Extensive de-novo TE Annotator
- Mining of Miniature Transposable Elements in Brassica species at BrassicaTED
- Genome-wide Identification of Miniature Inverted-Repeat Transposable Elements by Targeted High-Throughput Sequencing
- Identification of Extrachromosomal Circular Forms of Active Transposable Elements Using Mobilome-Seq
- Identification of Active Transposable Elements in Plants: The mobilome-seq Approach
- High-throughput Profiling of Extrachromosomal Linear DNAs of Long Terminal Repeat Retrotransposons by ALE-seq
- Bioinformatics Analysis Guides to LTR Retrotransposon-Derived Extrachromosomal Linear DNAs Identified by ALE-seq
- Determination of TE insertion Positions using Transposon Display
- Detection of Transposition Events from Next-Generation Sequencing Data
- Rapid Detection of Transposon-Induced Genome Rearrangements
- Detection of Transposable Element Insertions in Arabidopsis Using Sequence Capture
- Efficient Detection of Transposable Element Insertion Polymorphisms Between Genomes Using Short-Read Sequencing Data
- Quantitative Measurement of Transposon Copy Number using the Droplet Digital PCRDetecting Signatures of TE Polymorphisms in Short-read Sequencing Data
- How to Activate Heat-responsible Retrotransposon ONSEN in Brassicaceae Species
- Measurement of Genetic Mobility Using a Transposon-Based Marker System In Sorghum
- Sequence-specific Amplified Polymorphism (SSAP) and Sequence Characterized Amplified Region (SCAR) Markers in Zea mays
- Analysis of Plant DNA Methylation Profiles using R
- Arabidopsis thaliana Mature Endosperm Dissection and Isolation of Seed Tissue Genomic DNA
- Transposon-Based Tagging in Silico using FastPCR Software
- Bamboo Transposon Research: Current Status and Perspectives. .