Chromatin Accessibility [E-Book] : Methods and Protocols / edited by Georgi K. Marinov, William J. Greenleaf.
This detailed volume provides a comprehensive resource covering the existing and state-of-the-art tools in the field of profiling chromatin accessibility and its dynamics. Beginning with a section on bulk-cell methods for profiling chromatin accessibility and nucleosome positioning that rely on enzy...
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Full text |
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Personal Name(s): | Greenleaf, William J., editor |
Marinov, Georgi K., editor | |
Edition: |
1st edition 2023. |
Imprint: |
New York, NY :
Humana Press,
2023
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Physical Description: |
XI, 341 pages 57 illustrations, 50 illustrations in color (online resource) |
Note: |
englisch |
ISBN: |
9781071628997 |
DOI: |
10.1007/978-1-0716-2899-7 |
Series Title: |
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Methods in Molecular Biology ;
2611 |
Subject (LOC): |
- Genome-Wide Mapping of Active Regulatory Elements Using ATAC-Seq
- Mapping Nucleosome Location Using FS-Seq
- NicE-Seq: A Simple and Quick Method for Accessible Chromatin Detection in Fixed Cells
- Measuring Inaccessible Chromatin Genome-Wide Using Protect-Seq
- Determination of the Chromatin Openness in Bacterial Genomes
- Profiling Chromatin Accessibility on Replicated DNA with Repli-ATAC-Seq
- Analysis of Chromatin Interaction and Accessibility by Trac-Looping
- Single-Molecule Mapping of Chromatin Accessiility Using NOMe-Seq/dSMF
- ORE-Seq: Genome-Wide Absolute Occupancy Measurement by Restriction Enzyme Accessibilities
- Single-Cell Joint Profiling of Open Chromatin and Transcriptome by Paired-Seq
- Simultaneous Single-Cell Profiling of the Transcriptome and Accessible Chromatin Using SHARE-Seq
- Simultaneous Measurement of DNA Methylation and Nucleosome Occupancy in Single Cells Using scNOMe-Seq
- Massively Parallel Profiling of Accessible Chromatin and Proteins with ASAP-Seq
- Concomitant Sequencing of Accessible Chromatin and Mitochondrial Genomes in Single Cells Using mtscATAC-Seq
- ATAC-See: A Tn5 Transposase-Mediated Assay for Detection of Chromatin Accessibility with Imaging
- NicE-viewSeq: An Integrative Visualization and Genomics Method to Detect Accessible Chromatin in Fixed Cells
- ATAC-Seq Data Processing
- Deep Learning on Chromatin Accessibility.