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1

Journal Article

ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud

Seiffarth, Johannes
2024

SoftwareX, 26 (2024) S. 101638 -

“...Kohlheyer, Dietrich...”
OpenAccess

2

Automated Life-Cell Imaging meets AI - From Microbial Sensing to Insight and Control at Scale

Seiffarth, Johannes
2023

“...Kohlheyer, Dietrich...”

3

SATOMI and EMSIG: The Power Couple for Analyzing Microbial Live-Cell Experiments

Sitcheu, A. J. Y.
2023

“...Kohlheyer, Dietrich...”

4

Single-Cell Mass Balancing of Synthetic Co-Cultures

Gref, Patrick
2022

“...Kohlheyer, Dietrich...”

5

Conference Presentation

Communities of Niche-optimized Strains CoNoS — A novel concept for improving biotechnological production of small molecules

Schito, Simone
2022

“...Kohlheyer, Dietrich...”

6

Conference Presentation

Unraveling microbial co-cultures at the single-cell level inside closed picoliter chambers

Wollenhaupt, Bastian
2022

“...Kohlheyer, Dietrich...”

7

Journal Article

Assessing the growth kinetics and stoichiometry of Escherichia coli at the single‐cell level

Smaluch, Katharina
2022

Engineering in life sciences (2022) S. elsc.202100157

“...Kohlheyer, Dietrich...”
OpenAccess

8

Understanding Microbial Communities: The Microfluidic Live-Cell Microscopy Toolbox

Seiffarth, Johannes
2022

“...Kohlheyer, Dietrich...”

9

Journal Article

Communities of Niche-optimized Strains (CoNoS) – Design and creation of stable, genome-reduced co-cultures

Schito, Simone
2022

Metabolic engineering, 73 (2022) S. 91 - 103

“...Kohlheyer, Dietrich...”
OpenAccess

10

Conference Presentation

Deep-Learning Meets Microbial Live-Cell Imaging: Powerful Analysis Workflows from Annotation to Prediction

Seiffarth, Johannes
2022

“...Kohlheyer, Dietrich...”

11

ObiWan-Microbi & microbeSEG: Deep learning Tools for Microbial Image Analysis

Neumann, O.
2022

“...Kohlheyer, Dietrich...”

12

microbeSEG: A deep learning software tool with OMERO data management for efficient and accurate cell segmentation

Scherr, Tim
2022

“...Kohlheyer, Dietrich...”
OpenAccess

13

ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud

Seiffarth, Johannes
2022

bioRxiv (2022) S. 4

“...Kohlheyer, Dietrich...”
Get full text OpenAccess

14

Journal Article

microbeSEG: A deep learning software tool with OMERO data management for efficient and accurate cell segmentation

Scherr, Tim
2022

PLOS ONE, 17 (2022) 11, S. e0277601 -

“...Kohlheyer, Dietrich...”
OpenAccess

15

Conference Presentation

SATOMI - Tackling the segmentation and tracking challenges of growing colonies and microbial diversity

Scherr, T.
2021

“...Kohlheyer, Dietrich...”

16

SATOMI - Tackling the segmentation and tracking challenges of growing colonies and microbial diversity

Seiffarth, Johannes
2021

“...Kohlheyer, Dietrich...”

17

Conference Presentation

Single-cell mass balancing of synthetic co-cultures (SIBMAL)

Wollenhaupt, Bastian
2021

“...Kohlheyer, Dietrich...”

18

Microbial single-cell analysis under microfluidic batch cultivation

Wollenhaupt, Bastian
2020

“...Kohlheyer, Dietrich...”

19

Conference Presentation

Microbial single-cell analysis at controlled picoliter environments

Kohlheyer, Dietrich
2019

“...Kohlheyer, Dietrich...”

20

Conference Presentation

Cannibalism in Bacillus subtilis: coordinating toxin production with envelope stress responses

Popp, Philipp
2019

“...Kohlheyer, Dietrich...”

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