JuLib | Articles & more - {"Strodel, Birgit"}

1

Journal Article

A brief history of amyloid aggregation simulations

Fatafta, Hebah
2024

Wiley interdisciplinary reviews / Computational Molecular Science, 14 (2024) 1, S. e1703

“...Strodel, Birgit...”

2

Contribution to a book

Molecular Dynamics Simulations of Protein Aggregation: Protocols for Simulation Setup and Analysis with Markov State Models and Transition Networks

Li, Mai Suan
2022

“...Strodel, Birgit...”
OpenAccess

3

Journal Article

Disorder-to-order transition of the amyloid-β peptide upon lipid binding

Fatafta, Hebah
2022

Biophysical chemistry, 280 (2022) S. 106700 -

“...Strodel, Birgit...”
Restricted OpenAccess

4

Journal Article

Does the inclusion of electronic polarisability lead to a better modelling of peptide aggregation?

Kav, Batuhan
2022

RSC Advances, 12 (2022) 32, S. 20829 - 20837

“...Strodel, Birgit...”
OpenAccess

5

Journal Article

Amyloid aggregation simulations: challenges, advances and perspectives

Strodel, Birgit
2021

Current opinion in structural biology, 67 (2021) S. 145 - 152

“...Strodel, Birgit...”
Restricted Published on 2020-12-03. Available in OpenAccess from 2021-12-03.

6

Journal Article

Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer’s Disease, Parkinson’s Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis

Nguyen, Phuong H.
2021

Chemical reviews, 121 (2021) 4, S. 2545 - 2647

“...Strodel, Birgit...”
OpenAccess

7

Journal Article

The Effects of Different Glycosaminoglycans on the Structure and Aggregation of the Amyloid-β (16–22) Peptide

Samantray, Suman
2021

The journal of physical chemistry / B, 125 (2021) 21, S. 5511 - 5525

“...Strodel, Birgit...”

8

Journal Article

Amyloid-type Protein Aggregation and Prion-like Properties of Amyloids

Willbold, Dieter
2021

Chemical reviews, 121 (2021) 13, S. 8285 - 8307

“...Strodel, Birgit...”
Get full text OpenAccess

9

Journal Article

Dataset of AMBER force field parameters of drugs, natural products and steroids for simulations using GROMACS

Loschwitz, Jennifer
2021

Data in Brief, 35 (2021) S. 106948 -

“...Strodel, Birgit...”
Get full text OpenAccess

10

Journal Article

Chapter Five - Molecular simulations of IDPs: From ensemble generation to IDP interactions leading to disorder-to-order transitions

Fatafta, Hebah
2021

Progress in molecular biology and translational science, 183 (2021) S. 135-185

“...Strodel, Birgit...”

11

Journal Article

Thermodynamics and kinetics of the amyloid-β peptide revealed by Markov state models based on MD data in agreement with experiment

Paul, Arghadwip
2021

Chemical science, 12 (2021) 19, S. 6652 - 6669

“...Strodel, Birgit...”
OpenAccess

12

Journal Article

Novel inhibitors of the main protease enzyme of SARS-CoV-2 identified via molecular dynamics simulation-guided in vitro assay

Loschwitz, Jennifer
2021

Bioorganic chemistry, 111 (2021) S. 104862 -

“...Strodel, Birgit...”

13

Journal Article

The Influences of Sulphation, Salt Type, and Salt Concentration on the Structural Heterogeneity of Glycosaminoglycans

Samantray, Suman
2021

International journal of molecular sciences, 22 (2021) 21, S. 11529 -

“...Strodel, Birgit...”
OpenAccess

14

Journal Article

Energy Landscapes of Protein Aggregation and Conformation Switching in Intrinsically Disordered Proteins

Strodel, Birgit
2021

Journal of molecular biology, 433 (2021) 20, S. 167182 -

“...Strodel, Birgit...”

15

Journal Article

Amyloid-β peptide dimers undergo a random coil to β-sheet transition in the aqueous phase but not at the neuronal membrane

Fatafta, Hebah
2021

Proceedings of the National Academy of Sciences of the United States of America, 118 (2021) 39, S. e2106210118 -

“...Strodel, Birgit...”
OpenAccess

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