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Chromatin Accessibility [E-Book] : Methods and Protocols  /
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Transgenesis [E-Book] : Methods and Protocols  /
Table of Contents: ... to Enhance Knock-In Allele Homozygosity via Inter Homolog Repair Mechanism -- Electroporation-Mediated CRISPR/Cas9 Genome Editing in Rat Zygotes -- CRISMERE Chromosome Engineering in Mouse and Rat -- Targeted Integration of Transgenes at the Mouse Gt(ROSA)26Sor...

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Spatial Genome Organization [E-Book] : Methods and Protocols /
Table of Contents: ...Quantitative Chromosome Conformation Capture (3C-qPCR) -- Detection of Allele-Specific 3D Chromatin Interactions Using High-Resolution In-Nucleus 4C-Seq -- Tough Tissue Hi-C -- Mapping Mammalian 3D Genomes by Micro-C -- Targeted Chromosome Conformation...

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Epigenetic Reprogramming During Mouse Embryogenesis [E-Book] : Methods and Protocols /
Table of Contents: ... -- Investigating the Inner Cell Mass of the Mouse Blastocyst by Combined Immunofluorescence Staining and RNA Fluorescent In Situ Hybridization -- Mapping of Chromosome Territories by 3D-Chromosome Painting during Early Mouse Development -- Deciphering the Early Mouse...

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Computational Methods in Synthetic Biology [E-Book] /
Table of Contents: ... with Desired Functionalities -- A Deterministic Compartmental Modeling Framework for Disease Transmission -- Computer Aided Assembly and Verification of Synthetic Chromosomes -- Minimal Genome Design Algorithms using Whole-Cell Models -- Tn-Core: Functionally...

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DNA Modifications [E-Book] : Methods and Protocols /
Table of Contents: ... -- Computational Analysis of DNA Modifications in Confocal Images -- Three-Dimensional Confocal Analysis of Chromosome Positioning Coupled with Immunofluorescence in Mouse Sperm Nuclei -- Analysis of 5-Hydroxymethyluracil Levels Using Flow Cytometry -- Hairpin-Bisulfite...

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Capturing Chromosome Conformation [E-Book] : Methods and Protocols  /
Table of Contents: ...Capturing Chromosome Conformation -- The Chromosome Conformation Capture (3C) in Drosophila melanogaster -- 4C-Seq: Interrogating Chromatin Looping with Circular Chromosome Conformation Capture -- Analysis, Modeling, and Visualization of Chromosome...

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